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Auto-CORPus
The Automated pipeline for Consistent Outputs from Research Publications (Auto-CORPus) is a tool for the standardisation and conversion of publication HTML to three convenient machine-interpretable outputs (full-text, tables, abbreviations) in BioC-JSON formats to support biomedical text analytics.
- bioc
- html
- information retrieval
- + 4
8
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MicrobELP
microbELP is a text mining pipeline for automatic recognition and normalisation of microbiome-related entities in biomedical literature. It identifies microbial mentions (excluding viruses) in full-text scientific articles and links them to their NCBI Taxonomy identifiers.
- bionlp
- entity linking
- information retrieval
- + 8
5
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